Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842424.1_cds_XP_016508382.1_21410
CDS Infomation

[gene=LOC107825966] [db_xref=GeneID:107825966] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016508382.1] [location=join(49876..50395,50504..51115,51201..51691)] [gbkey=CDS]
Sequence

ATGTTAAAAAGTGAGTATCGAATGCGTTTAGAAGCATCAATTGATGTGGCAAGACTTCTA
TTATTGTATGGATTGCCTTTTAGGGGCCATGACGAAAGTGAATCTTCAACAAATCAAGGC
CTCTTTCTAGGATTCTTACAATGGCATGGGGACAAGCATCCGGATGTGGGAAAAGTAATA
TTAGAAAATGCTCCACAAAATGATACTTTGACTTGCCCTATAATCCAAAAGGATATTATC
AATGCTTGTGCAAAAGAAACATTAAAGGCTATAATTGTAGACTTGAATGGAGATTACTTT
GGTATATTAGTTGATGAGTCCAAAGATATCTCACACAAAGAACAAATGGCTCTTGTTTTG
TGTTATGTTGATAAGAATGGTGAAGTGGTAGAGCGATTTGTTGGTCTTGTTCATGTTAGT
GATACATCGGCATGCTCATTGAAGGAAGAAATCTACTCTTTGCTTTCGGACCACTCACTA
AGTCCATCCCAAATACGTGGACAAGGTTATGATGGAGCTACTATGTCTAAAAAGCATTTG
GATGTCGAAGACTTCTTCTGTCATGTTACTAATATGTTGAATGTCATTGGAGTATCTTTT
AAGCGTAGAAATTTGCTTCGCCATCTTCAAGCTGAAAAACTGGAGCAATTACTTGAGTCT
GGTGAAATTCATACCGGGCGAGGACTAAATCAAGAACGCGGGCTTCAAAGACCAGGTGAT
ACTCGTTGGGGATCACATTTCAAAATATTAGATAACTTTATTGTTATTTTCTCATCTATT
ATTCGTGTGCTTGAAGTGATTGAACATGAAGGTTCTACCTCAAATGAGAGAAATCAAGCA
AAATATCTTTTGAGTGAGATAATAACATTTAAATTTGTTTTTATGCTTCACTTGATGTTG
AAAGTTTTGGCAATGTCAAATGAGTTGAACAAGATCCTACAAAAGAGAGATCAAGATATT
GTTGATGCCGTGGAGTTTCTTAAGATTACAAAGAAAATATTGCAAGATATGAGAGAAACT
GGATGGAAATCTTTGCTAGATGACGTTTCCTCATTTTGTCATATGCGTGATATTATAATT
CCCAAGATGGATGAATCCTATTTTCCTGGAAAGTCGAAGCGCAAGTCTTCTGTGAGTAGC
GAATTGCTTCTTGGGATGGCTAGCTTTAATCCAGTCAATTCTTTTGCTAATTTTGATAAA
AGTAGAATAATGACTTTAGCAAAATGTTACCCAAATGAGTTTGATGAAGTACAGATTCGA
GACTTGAGTTATCAACTAGATACTTTCATAATTCATATGCGAGCTGGCAATCTCAAGTTC
TCCAACTTGCAAGGAATTAGTGATTTGGCAAAAGCATTGGTTGAGACAAATCTTGTGGAG
ACTTATTCGTATGTTTATCTACTTGTGAAGTTAACTCTGATTTTACATGTTGCTACCGCA
ACTATGGAGAGAGCATTCTCATCCATGAAGCGGATAAAGAATGAAGAGCGGAACAACATG
GGTGATCAATATTTAAATGATTGTTTAGTTTGTTACATAGAGCGTGATGTATTTACAAAT
ATAAGTAATGATGTCATTATTGATCGTTTTCAAAATATGAAAGCTCGTAGAGGACAATTG
TAA

Peptide Sequence

PEP ID

XP_016508382.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MLKSEYRMRLEASIDVARLLLLYGLPFRGHDESESSTNQGLFLGFLQWHGDKHPDVGKVI
LENAPQNDTLTCPIIQKDIINACAKETLKAIIVDLNGDYFGILVDESKDISHKEQMALVL
CYVDKNGEVVERFVGLVHVSDTSACSLKEEIYSLLSDHSLSPSQIRGQGYDGATMSKKHL
DVEDFFCHVTNMLNVIGVSFKRRNLLRHLQAEKLEQLLESGEIHTGRGLNQERGLQRPGD
TRWGSHFKILDNFIVIFSSIIRVLEVIEHEGSTSNERNQAKYLLSEIITFKFVFMLHLML
KVLAMSNELNKILQKRDQDIVDAVEFLKITKKILQDMRETGWKSLLDDVSSFCHMRDIII
PKMDESYFPGKSKRKSSVSSELLLGMASFNPVNSFANFDKSRIMTLAKCYPNEFDEVQIR
DLSYQLDTFIIHMRAGNLKFSNLQGISDLAKALVETNLVETYSYVYLLVKLTLILHVATA
TMERAFSSMKRIKNEERNNMGDQYLNDCLVCYIERDVFTNISNDVIIDRFQNMKARRGQL

Transcript Sequence

Gene sequence data has not been registered.